MetaDataApp-Wiki/SFB-1280-metadata-fields.md

@@ -64,7 +64,7 @@ No multiple selection allowed.
 
 **Definition:** Characteristics of the data.
 
-**Constraints:** MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
+**Constraints:** The MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
 
 * behavioral
 * ECG|Pulse
@@ -80,7 +80,7 @@ No multiple selection allowed.
 * Single cell recording
 * TMS
 
-it is possible to select more than one value in the MetaDataAppn by holding “Ctrl”/ ”Strg”button on the keyboard.
+It is possible to select more than one value in the MetaDataAppn by holding “Ctrl”/ ”Strg”button on the keyboard.
 
 **Example:** TMS
 
@@ -88,23 +88,31 @@ it is possible to select more than one value in the MetaDataAppn by holding “C
 
 **Definition:** Characteristics of the data.
 
-**Constraints:** MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
-
-* behavioral
-* ECG|Pulse
-* EDA
-* EEG
-* Eyetracking
-* Histology
-* Hormone Measurements
-* LFP
-* MRI
-* Questionnaires
-* Respiration
-* Single cell recording
-* TMS
-
-it is possible to select more than one value in the MetaDataAppn by holding “Ctrl”/ ”Strg”button on the keyboard.
+**Constraints:** The MetaDataApp enables selection from the following list of SFB groups (see Group ID):
+
+* A01
+* A02
+* A03
+* A04
+* A05
+* A06
+* A07
+* A08
+* A09
+* A10
+* A11
+* A12
+* A13
+* A14
+* A15
+* A16
+* A18
+* A19
+* A21
+* F01
+* F02
+
+It is possible to select more than one value in the MetaDataAppn by holding “Ctrl”/ ”Strg”button on the keyboard.
 
 **Example:** TMS
 
@@ -114,20 +122,84 @@ it is possible to select more than one value in the MetaDataAppn by holding “C
 
 **Constraints:** Free text entry
 
-**Example single creator:** Güntürkün, Onur
+**Example:** Reward prediction errors (RPEs) have been suggested to drive associative learning processes, but their precise temporal dynamics at the single-neuron level remain elusive. Here, we studied the neural correlates of RPEs, focusing on their trial-by-trial dynamics during an operant extinction learning paradigm. Within a single behavioral session, pigeons went through acquisition, extinction and renewal - the context-dependent response recovery after extinction. We recorded single units from the avian prefrontal cortex analogue, the nidopallium caudolaterale (NCL). 
 
-**Example multiple creators:** Güntürkün, Onur; Axmacher, Nikolai
+Packheiser, J., Donoso, J. R., Cheng, S., Güntürkün, O., & Pusch, R. (2021). Trial-by-trial dynamics of reward prediction error-associated signals during extinction learning and renewal. _Progress in neurobiology_, _197_, 101901. https://doi.org/10.1016/j.pneurobio.2020.101901
 
 ### 10. Subject ID
 
+**Definition:** ID that uniquely identifies each subject within the experiment. 
+
+**Constraints:** For human subjects, the 11 digit  [SFB subject code](https://gitlab.ruhr-uni-bochum.de/sfb1280/subject_code_generator) should be used. For animals, aother unique identfier e.g. for pigeons the ring number. 
+
+**Example:** sub-BL07AM01IE5
+
 ### 11. Subject Species
 
+**Definition:** Species of the subject studied in the experiment or study.
+
+**Constraints:** The MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
+
+* humans
+* pigeons
+* mice
+* rats
+* crows
+* jackdaws
+
+No multiple selection allowed. But it is also possible to type a new value in the MetaDataApp. To do so click on the empty text field and simply start typing.
+
+**Example:** humans
+
 ### 12. Subject Type
 
+**Definition:** Characteristics of the subject in the context of the study. 
+
+**Constraints:** The MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
+
+* Healthy test subject
+* Patient
+* Healthy control subject.
+
+No multiple selection allowed. 
+
+**Example:** healthy test subject
+
 ### 13. Subject Sex
 
+**Definition:** Specification of the sex of the test subject. 
+
+**Constraints:** The MetaDataApp enables selection from the following list of fixed terms agreed upon in the SFB:
+
+* male
+* female
+* diverse
+* undefined
+
+No multiple selection allowed. Please select "undefined" when the sex of experimental animals is not relevant and therefore has not been determined.
+
+**Example:** female
+
 ### 14. Subject Age
 
+**Definition:** Age of the test subject in either years. 
+
+**Constraints:** In the MetaData app, you can enter numbers in the "Subject age" field and adjust them using up and down arrows. The age in years is the default setting. However, months can also be selected. If you enter age in months, it will be automatically converted to years for saving in meta.json.
+
+**Example:** 24
+
 ### 15. Animal/Ethics Approval No.
 
+**Definition:** The official number or code of your animal/ethics approval
+
+**Constraints:** free text entry.
+
+**Example:** 16-7248-BO
+
 ### 16. Extra Information
+
+**Definition:** Any extra information that might be of relevance to understand the data (e.g. intervention group, data format)
+
+**Constraints:** free text entry
+
+**Example:** Stress group participant, data in BIDS
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